TOOLS
Tools & code
Open-source implementations from published research, maintained on GitHub at github.com/nrohani.
NDD
Drug–drug interaction prediction by neural network using integrated similarity. Companion code for the 2019 Scientific Reports paper.
ISCMF
Integrated similarity-constrained matrix factorization for drug–drug interaction prediction.
MolecularSubtypes
Deep-embedded clustering approach for classifying breast cancer molecular subtypes.
Drug–disease interaction prediction
Semi-supervised graph-cut algorithm for predicting drug–disease associations.
SARS-CoV-2
Computational discovery of candidate RNAi-based therapies for SARS-CoV-2.